V.N. Mirny : rechercher sur Z-Library

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Articles (145)
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Otolith biochronology as an indicator of marine fish responses to hydroclimatic conditions and ecosystem regime shifts

Smoliński, Szymon, Mirny, Zuzanna

Journal:

Ecological Indicators

Année:

2017

Langue:

english

Fichier:

PDF, 1.59 MB

english, 2017

Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartmentalization

Nora, Elphège P., Goloborodko, Anton, Valton, Anne-Laure, Gibcus, Johan H., Uebersohn, Alec, Abdennur, Nezar, Dekker, Job, Mirny, Leonid A., Bruneau, Benoit G.

Journal:

Cell

Année:

2017

Langue:

english

Fichier:

PDF, 8.54 MB

english, 2017

Supplementation of fermented coffee-peel flour to increase high-density lipoprotein (HDL) cholesterol, docosahexaenoic acids (DHA) and eicosapentaenoic acids (EPA) deposition in tilapia fillet

Fitria, Pingky D., Amin, Muhamad, Lokapirnasari, Widya P., Lamid, Mirni

Journal:

Biocatalysis and Agricultural Biotechnology

Année:

2020

Langue:

english

Fichier:

PDF, 814 KB

english, 2020

Substitution of commercial feed with phytase-fermented rice bran and turmeric flour to increase EPA, DHA, and protein depositions in broiler meat

Al-Arif, Muhammad A., Warsito, S.H., Amin, Muhamad, Lamid, Mirni

Journal:

Biocatalysis and Agricultural Biotechnology

Année:

2020

Fichier:

PDF, 894 KB

2020

Comparison of two optimization methods to derive energy parameters for protein folding: Perceptron and Z score

Michele Vendruscolo, Leonid A. Mirny, Eugene I. Shakhnovich, Eytan Domany

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2000

Langue:

english

Fichier:

PDF, 222 KB

english, 2000

The fractal globule as a model of chromatin architecture in the cell

Leonid A. Mirny

Journal:

Chromosome Research

Année:

2011

Langue:

english

Fichier:

PDF, 583 KB

english, 2011

Monte Carlo modeling of epidemiological studies

Shlyakhter, Alexander, Mirny, Leonid, Vlasov, Alexander, Wilson, Richard

Journal:

Human and Ecological Risk Assessment An International Journal

Année:

1996

Langue:

english

Fichier:

PDF, 919 KB

english, 1996

Protein knot server: detection of knots in protein structures

Kolesov, G., Virnau, P., Kardar, M., Mirny, L. A.

Journal:

Nucleic Acids Research

Année:

2007

Langue:

english

Fichier:

PDF, 1.65 MB

english, 2007

Schooling, Peer Relations, and Family Life of Russian Adolescents

Holloway, S. D., Mirny, A. I., Bempechat, J., Jin Li,

Journal:

Journal of Adolescent Research

Année:

2008

Langue:

english

Fichier:

PDF, 97 KB

english, 2008

Super-resolution imaging reveals distinct chromatin folding for different epigenetic states

Boettiger, Alistair N., Bintu, Bogdan, Moffitt, Jeffrey R., Wang, Siyuan, Beliveau, Brian J., Fudenberg, Geoffrey, Imakaev, Maxim, Mirny, Leonid A., Wu, Chao-ting, Zhuang, Xiaowei

Journal:

Nature

Année:

2016

Langue:

english

Fichier:

PDF, 1.54 MB

english, 2016

The 3D Genome as Moderator of Chromosomal Communication

Dekker, Job, Mirny, Leonid

Journal:

Cell

Année:

2016

Langue:

english

Fichier:

PDF, 1017 KB

english, 2016

Single-nucleus Hi-C reveals unique chromatin reorganization at oocyte-to-zygote transition

Flyamer, Ilya M., Gassler, Johanna, Imakaev, Maxim, Brandão, Hugo B., Ulianov, Sergey V., Abdennur, Nezar, Razin, Sergey V., Mirny, Leonid A., Tachibana-Konwalski, Kikuë

Journal:

Nature

Année:

2017

Langue:

english

Fichier:

PDF, 10.75 MB

english, 2017

AIP Conference Proceedings [Author(s) THE 1ST INTERNATIONAL CONFERENCE ON MATHEMATICS, SCIENCE, AND COMPUTER SCIENCE (ICMSC) 2016: Sustainability and Eco Green Innovation in Tropical Studies for Global Future - East Kalimantan, Indonesia (19–21 October 2016)] - Probiotic activity of lignocellulosic enzyme as bioactivator for rice husk degradation

Lamid, Mirni, Al-Arif, Anam, Warsito, Sunaryo Hadi

Année:

2017

Langue:

english

Fichier:

PDF, 168 KB

english, 2017

Hi-C: A Method to Study the Three-dimensional Architecture of Genomes.

van Berkum, Nynke L., Lieberman-Aiden, Erez, Williams, Louise, Imakaev, Maxim, Gnirke, Andreas, Mirny, Leonid A., Dekker, Job, Lander, Eric S.

Journal:

Journal of Visualized Experiments

Année:

2010

Langue:

english

Fichier:

PDF, 415 KB

english, 2010

Cryptic occurrence of Chattonella marina var. marina in mangrove sediments in Probolinggo, East Java Province, Indonesia

Ayu-Lana-Nafisyah,, Endang-Dewi-Masithah,, Matsuoka, Kazumi, Mirni-Lamid,, Mochammad-Amin-Alamsjah,, O-hara, Shizuka, Koike, Kazuhiko

Journal:

Fisheries Science

Année:

2018

Langue:

english

Fichier:

PDF, 3.20 MB

english, 2018

Protein fold recognition and dynamics in the space of contact maps

Mirny, Leonid, Domany, Eytan

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

1996

Langue:

english

Fichier:

PDF, 1.89 MB

english, 1996

Dancing on DNA: Kinetic Aspects of Search Processes on DNA

Dr. Anahita Tafvizi, Prof. Dr. Leonid A. Mirny, Prof. Dr. Antoine M. van Oijen

Journal:

ChemPhysChem

Année:

2011

Langue:

english

Fichier:

PDF, 631 KB

english, 2011

Metal complexes of carbohydrates: chelate complexes of some nitrogen heterocycle—monosaccharide derivatives

Yu.A. Zhdanov, O.A. Osipov, V.P. Grigoriev, A.D. Garnovsky, Yu.E. Alexeev, V.G. Alexeeva, N.M. Gontmacher, P.A. Perov, V.G. Zaliotov, V.N. Fomina, T.A. Useman, O.N. Nechaeva, V.N. Mirny

Journal:

Carbohydrate Research

Année:

1974

Langue:

english

Fichier:

PDF, 169 KB

english, 1974

Understanding conserved amino acids in proteins

Nikolay V. Dokholyan, Leonid A. Mirny, Eugene I. Shakhnovich

Journal:

Physica A: Statistical Mechanics and its Applications

Année:

2002

Langue:

english

Fichier:

PDF, 121 KB

english, 2002

Fold recognition with minimal gaps

William Chen, Leonid Mirny, Eugene I. Shakhnovich

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2003

Langue:

english

Fichier:

PDF, 278 KB

english, 2003

Morphometry of turbot spermatozoa in relation to the location and time of capture during the spawning season

E. Gosz, Z. Mirny, J. Horbowy, M.S. Ziętara

Journal:

Journal of Applied Ichthyology

Année:

2010

Langue:

english

Fichier:

PDF, 253 KB

english, 2010

10.1038/74111

Shakhnovich, Eugene I., Li, Lewyn, Mirny, Leonid A.

Journal:

Natural Structural Biology

Année:

2000

Langue:

english

Fichier:

PDF, 333 KB

english, 2000

10.1038/74122

Shakhnovich, Eugene I., Li, Lewyn, Mirny, Leonid A.

Journal:

Nature Genetics

Année:

2000

Langue:

english

Fichier:

PDF, 252 KB

english, 2000

Biophysics: Cell commuters avoid delays

Mirny, Leonid

Journal:

Nature Physics

Année:

2008

Langue:

english

Fichier:

PDF, 341 KB

english, 2008

Effect of the ponderomotive force on the development of beam-plasma instability

Yu. P. Bliokh, M. G. Lyubarsky, N. M. Zemlyansky, V. I. Mirny, V. O. Podobinsky, G. V. Sotnikov, Ya. B. Fainberg

Journal:

Plasma Physics Reports

Année:

2003

Langue:

english

Fichier:

PDF, 267 KB

english, 2003

Interaction of microwave radiation undergoing stochastic phase jumps with plasmas or gases

V. I. Karas’, Ya. B. Fainberg, A. F. Alisov, A. M. Artamoshkin, R. Bingham, I. V. Gavrilenko, V. D. Levchenko, M. Lontano, V. I. Mirny, I. F. Potapenko, A. N. Starostin

Journal:

Plasma Physics Reports

Année:

2005

Langue:

english

Fichier:

PDF, 918 KB

english, 2005

A Ligand-Based Approach to Understanding Selectivity of Nuclear Hormone Receptors PXR, CAR, FXR, LXRα, and LXRβ

Sean Ekins, Leonid Mirny, Erin G. Schuetz

Journal:

Pharmaceutical Research

Année:

2002

Langue:

english

Fichier:

PDF, 747 KB

english, 2002

How a protein searches for its site on DNA: the mechanism of facilitated diffusion

Mirny, Leonid, Slutsky, Michael, Wunderlich, Zeba, Tafvizi, Anahita, Leith, Jason, Kosmrlj, Andrej

Journal:

Journal of Physics A Mathematical and Theoretical

Année:

2009

Langue:

english

Fichier:

PDF, 1.38 MB

english, 2009

Different gene regulation strategies revealed by analysis of binding motifs

Zeba Wunderlich, Leonid A. Mirny

Journal:

Trends in Genetics

Année:

2009

Langue:

english

Fichier:

PDF, 700 KB

english, 2009

Universality and diversity of the protein folding scenarios:a comprehensive analysis with the aid of a lattice model

Leonid A Mirny, Victor Abkevich, Eugene I Shakhnovich

Journal:

Folding and Design

Année:

1996

Langue:

english

Fichier:

PDF, 948 KB

english, 1996

High order chromatin architecture shapes the landscape of chromosomal alterations in cancer

Fudenberg, Geoff, Getz, Gad, Meyerson, Matthew, Mirny, Leonid A

Journal:

Nature Biotechnology

Année:

2011

Langue:

english

Fichier:

PDF, 628 KB

english, 2011

Sequence-dependent sliding kinetics of p53

Leith, J. S., Tafvizi, A., Huang, F., Uspal, W. E., Doyle, P. S., Fersht, A. R., Mirny, L. A., van Oijen, A. M.

Journal:

Proceedings of the National Academy of Sciences

Année:

2012

Langue:

english

Fichier:

PDF, 1.25 MB

english, 2012

PROTEIN FOLDING THEORY: From Lattice to All-Atom Models

Mirny, Leonid, Shakhnovich, Eugene

Journal:

Annual Review of Biophysics and Biomolecular Structure

Année:

2001

Langue:

english

Fichier:

PDF, 652 KB

english, 2001

How to Derive a Protein Folding Potential? A New Approach to an Old Problem

Leonid A. Mirny, Eugene I. Shakhnovich

Journal:

Journal of Molecular Biology

Année:

1996

Langue:

english

Fichier:

PDF, 638 KB

english, 1996

Protein structure prediction by threading. why it works and why it does not

Leonid A. Mirny, Eugene I. Shakhnovich

Journal:

Journal of Molecular Biology

Année:

1998

Langue:

english

Fichier:

PDF, 618 KB

english, 1998

Universally conserved positions in protein folds: reading evolutionary signals about stability, folding kinetics and function

Leonid A. Mirny, Eugene I. Shakhnovich

Journal:

Journal of Molecular Biology

Année:

1999

Langue:

english

Fichier:

PDF, 1.10 MB

english, 1999

Detection of α/β-hydrolase fold in the cell surface esterases of Acinetobacter species using an analysis of 3D profiles

Rinat N. Alon, Leonid Mirny, Joel L. Sussman, David L. Gutnick

Journal:

FEBS Letters

Année:

1995

Langue:

english

Fichier:

PDF, 1013 KB

english, 1995

Zfx Controls the Self-Renewal of Embryonic and Hematopoietic Stem Cells

Jose M. Galan-Caridad, Sivan Harel, Teresita L. Arenzana, Z. Esther Hou, Fiona K. Doetsch, Leonid A. Mirny, Boris Reizis

Journal:

Cell

Année:

2007

Langue:

english

Fichier:

PDF, 1.65 MB

english, 2007

Higher-order chromatin structure: bridging physics and biology

Geoffrey Fudenberg, Leonid A Mirny

Journal:

Current Opinion in Genetics & Development

Année:

2012

Langue:

english

Fichier:

PDF, 701 KB

english, 2012

Using Orthologous and Paralogous Proteins to Identify Specificity-determining Residues in Bacterial Transcription Factors

Leonid A. Mirny, Mikhail S. Gelfand

Journal:

Journal of Molecular Biology

Année:

2002

Langue:

english

Fichier:

PDF, 645 KB

english, 2002

Evolutionary conservation of the folding nucleus

Leonid Mirny, Eugene Shakhnovich

Journal:

Journal of Molecular Biology

Année:

2001

Langue:

english

Fichier:

PDF, 267 KB

english, 2001

Kinetics of Protein-DNA Interaction: Facilitated Target Location in Sequence-Dependent Potential

Slutsky, Michael, Mirny, Leonid A.

Journal:

Biophysical Journal

Année:

2004

Langue:

english

Fichier:

PDF, 344 KB

english, 2004

Using the Topology of Metabolic Networks to Predict Viability of Mutant Strains

Wunderlich, Zeba, Mirny, Leonid A.

Journal:

Biophysical Journal

Année:

2006

Langue:

english

Fichier:

PDF, 204 KB

english, 2006

Intrinsic Fluctuations, Robustness, and Tunability in Signaling Cycles

Levine, Joseph, Kueh, Hao Yuan, Mirny, Leonid

Journal:

Biophysical Journal

Année:

2007

Langue:

english

Fichier:

PDF, 403 KB

english, 2007

Tumor Suppressor p53 Slides on DNA with Low Friction and High Stability

Tafvizi, Anahita, Huang, Fang, Leith, Jason S., Fersht, Alan R., Mirny, Leonid A., van Oijen, Antoine M.

Journal:

Biophysical Journal

Année:

2008

Langue:

english

Fichier:

PDF, 307 KB

english, 2008

Iterative correction of Hi-C data reveals hallmarks of chromosome organization

Imakaev, Maxim, Fudenberg, Geoffrey, McCord, Rachel Patton, Naumova, Natalia, Goloborodko, Anton, Lajoie, Bryan R, Dekker, Job, Mirny, Leonid A

Journal:

Nature Methods

Année:

2012

Langue:

english

Fichier:

PDF, 1.17 MB

english, 2012

Impact of deleterious passenger mutations on cancer progression

McFarland, C. D., Korolev, K. S., Kryukov, G. V., Sunyaev, S. R., Mirny, L. A.

Journal:

Proceedings of the National Academy of Sciences

Année:

2013

Langue:

english

Fichier:

PDF, 903 KB

english, 2013

Diffusion in correlated random potentials, with applications to DNA

Slutsky, Michael, Kardar, Mehran, Mirny, Leonid

Journal:

Physical Review E

Année:

2004

Langue:

english

Fichier:

PDF, 391 KB

english, 2004

Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data

Dekker, Job, Marti-Renom, Marc A., Mirny, Leonid A.

Journal:

Nature Reviews Genetics

Année:

2013

Langue:

english

Fichier:

PDF, 6.32 MB

english, 2013

Using Topology of the Metabolic Network to Predict Viability of Mutant Strains

Zeba Wunderlich, Leonid Mirny

Journal:

Genome Biology

Année:

2005

Langue:

english

Fichier:

PDF, 2.99 MB

english, 2005